The detailed information of tRNA gene sequence


Sequence ID>WENV170297454
Genome IDCESE01149030
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2000
End posion on genome 2072
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attatatcta
tRNA gene sequence 
GATGTTGTCGTCCAACCGGTTAAGACGGTTGTCTCATAAGCAACCAATGGGAGTTCAAGT
CTCTCCAACATTAtat
Downstream region at tRNA end position 
gttaagtcta
Secondary structure (Cloverleaf model)
>WENV170297454	Met	CAT
                   a      Atat gttaagtcta
                     G + T
                     A - T
                     T - A
                     G - C
                     T - A
                     T - A
                     G - C          T G
                    T     C T C T C     A
      C A A        C      | + | | |     A
    C       C C T G       G G G A G     C
    G         | | |                 T T
    G       A G A C
      T T A        G     CAAT
                    G - C
                    T - A
                    T - A
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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