The detailed information of tRNA gene sequence


Sequence ID>WENV170297633
Genome IDCESE01256392
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 207
End posion on genome 134
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctttttttgt
tRNA gene sequence 
TGGGTCTATAGTATAGGGGCTAATATTCTTGTCTTCAAAATAAGAGACCTAGGTTCGATT
CCTAGTGGACCTGTtaa
Downstream region at tRNA end position 
aattgtatca
Secondary structure (Cloverleaf model)
>WENV170297633	SeC	TCA
                   t      Ttaa aattgtatca
                     T + G
                     G + T
                     G - C
                     G - C
                     T - A
                     C - G
                     T + G
                     A - T          T T
                    T     G A T C C     A
      G G A        A      | | | | |     G
    G       T A T G       C T A G G     C
    G       | | | +                 T T
    C       A T A T
      T A          T     AGAC
                    C - G
                    T - A
                    T - A
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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