The detailed information of tRNA gene sequence


Sequence ID>WENV170297991
Genome IDCESF01031750
Search identical group
Phylum/Class[CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2378
End posion on genome 2454
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atctataaat
tRNA gene sequence 
GGCGAGATAGCTCAGTTGGTTAGAGCGTCGGATTCATAACCCGGAGGTCACGAGTTCAAA
TCTCGTTCTCGCTACTA
Downstream region at tRNA end position 
tttttcagct
Secondary structure (Cloverleaf model)
>WENV170297991	Met	CAT
                   t      ACTA tttttcagct
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G C T C     A
      T G A        A      | | | | |     A
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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