The detailed information of tRNA gene sequence


Sequence ID>WENV170297994
Genome IDCESF01032134
Search identical group
Phylum/Class[CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1373
End posion on genome 1282
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcaaagaaa
tRNA gene sequence 
GGAGGGATGGCAGAGTCTGGTTTATTGTAGCGGTCTTGAAAACCGTCGTGCCTTCATCGG
CACCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
taaatgtatg
Secondary structure (Cloverleaf model)
>WENV170297994	Ser	TGA
                   a      GCCA taaatgtatg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  T         G A C G       G T G G G     C
  G         + | | +                 T T
  G         T T G T
    T T T A        A     CGTGCCTTCATCGGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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