The detailed information of tRNA gene sequence


Sequence ID>WENV170298434
Genome IDCESF01118719
Search identical group
Phylum/Class[CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 22561
End posion on genome 22649
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctccaaattt
tRNA gene sequence 
GGAAGAGTGCAGAAATTGGTAGATTGAGCGGTTTGCTAAACCGTAGTCCTTAACAGGGCA
TGTGGGTTCGAGTCCCACCTCTTCCTCCA
Downstream region at tRNA end position 
aattaataca
Secondary structure (Cloverleaf model)
>WENV170298434	Ser	GCT
                   t      TCCA aattaataca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       A G A C       G T G G G     C
    G         + | |                 T T
    G       A T T G
      T A G        A     AGTCCTTAACAGGGCAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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