The detailed information of tRNA gene sequence


Sequence ID>WENV170299295
Genome IDCESG01024167
Search identical group
Phylum/Class[CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 219
End posion on genome 127
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catttgacac
tRNA gene sequence 
GGAGAGGTGGCAGAGATGGTTGATCGCACCAGGTTGCTAACTTGGCATACGGAGTAATTC
GTATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aacctaaaat
Secondary structure (Cloverleaf model)
>WENV170299295	Ser	GCT
                   c      GCCA aacctaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T A G A        G      | | | | |     G
  G         G A C G       G A G G G     C
  G         +   | |                 T T
  T         T C G C
    T G A          A     CATACGGAGTAATTCGTATC
                    C - G
                    C - G
                    A - T
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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