The detailed information of tRNA gene sequence


Sequence ID>WENV170300512
Genome IDCESG01132601
Search identical group
Phylum/Class[CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1474
End posion on genome 1396
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agtctttatt
tRNA gene sequence 
GGGGGCGAATGTACCAAGGGTAAGGCGAGAAATCTTTGCAAGTTTTCTGAGGTGGGTTCG
ATTCCCACCGTCTCCACCA
Downstream region at tRNA end position 
aaaattcaaa
Secondary structure (Cloverleaf model)
>WENV170300512	Ala	TGC
                   t      ACCA aaaattcaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          T T
                    A     C A C C C     A
    A A C C        A      | | | | |     G
  G         A T G T       G T G G G     C
  G           + | +                 T T
  G         G G C G
    T A A          A     TCTGAG
                    G + T
                    A - T
                    A - T
                    A   G
                    T - A
                  C       A
                  T       C
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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