The detailed information of tRNA gene sequence


Sequence ID>WENV170300580
Genome IDCESG01136908
Search identical group
Phylum/Class[CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1131
End posion on genome 1220
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataacgtttt
tRNA gene sequence 
GGAGAGGTGGTAGAGTCTGGTTTATTACAACGGTCTTGAAAACCGTCGAACCGCAAGGTT
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aaacttactt
Secondary structure (Cloverleaf model)
>WENV170300580	Ser	TGA
                   t      GCCA aaacttactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  T         G A T G       G T G G G     C
  G         + | | |                 T T
  G         T T A C
    T T T A        A     CGAACCGCAAGGTTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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