The detailed information of tRNA gene sequence


Sequence ID>WENV170300676
Genome IDCESG01139765
Search identical group
Phylum/Class[CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 17245
End posion on genome 17160
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagggctcca
tRNA gene sequence 
GGAGGGTTCGCATAGTGGTCTAGTGCGCTCGCTTGGAAAGCGAGTAGGGGGCAACCCCTC
ATGGGTTCGAATCCCATACCCTCCGCat
Downstream region at tRNA end position 
ttatttatat
Secondary structure (Cloverleaf model)
>WENV170300676	Ser	GGA
                   a      GCat ttatttatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       A T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TAGGGGGCAACCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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