The detailed information of tRNA gene sequence


Sequence ID>WENV170304311
Genome IDCESI01034253
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 26887
End posion on genome 26815
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaatattta
tRNA gene sequence 
AGGCTTATAGTTCAGTTGGTAGAACGTACCGCTCATAACGGTTTTGTCATAGGTTCAAAT
CCTGTTAAGCCTAatt
Downstream region at tRNA end position 
tttagtcatc
Secondary structure (Cloverleaf model)
>WENV170304311	Met	CAT
                   a      Aatt tttagtcatc
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T A
                    T     T G T C C     A
      T G A        A      | + | | |     A
    T       C T T G       A T A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     TTGTC
                    T   T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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