The detailed information of tRNA gene sequence


Sequence ID>WENV170304858
Genome IDCESI01084905
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 199
End posion on genome 108
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taattgcaaa
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGCCGAAAGGAGCGGTTTGCTAAATCGTCGTACCCTAACAAGGG
TACCCAGGGTTCGAATCCCTGTCTCTCCGCTA
Downstream region at tRNA end position 
agtaaccgaa
Secondary structure (Cloverleaf model)
>WENV170304858	Ser	GCT
                   a      GCTA agtaaccgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       C A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACCCTAACAAGGGTACC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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