The detailed information of tRNA gene sequence


Sequence ID>WENV170305707
Genome IDCESI01175556
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 235
End posion on genome 144
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaattgttaA
tRNA gene sequence 
ATAGGTGTAGCTTAGTTTGGTTTAAAGCGATATTTTGCTAAAATATTAGGTAATTATATT
ACCTCATGAGTTCAAATCTCATTACCTATTTtt
Downstream region at tRNA end position 
tttgtttcat
Secondary structure (Cloverleaf model)
>WENV170305707	Ser	GCT
                   A      TTtt tttgtttcat
                     A - T
                     T - A
                     A - T
                     G - C
                     G - C
                     T - A
                     G + T          T A
                    T     T A C T C     A
    T T G A        A      | | | | |     A
  T         T T C G       A T G A G     C
  G         | | | |                 T T
  G         A A G C
    T T T A        G     TAGGTAATTATATTACCTC
                    A - T
                    T - A
                    A - T
                    T - A
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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