The detailed information of tRNA gene sequence


Sequence ID>WENV170305821
Genome IDCESI01252116
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 692
End posion on genome 603
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgctctgtc
tRNA gene sequence 
TTAGGTATTACTTAGCTTGGTTGAAAGTGGCATTTTGCTAAAATGTTAAATTTTTATAAA
ATTTCACGTGTTCAAATCACGTTGCCTAATatt
Downstream region at tRNA end position 
tttacaaaat
Secondary structure (Cloverleaf model)
>WENV170305821	Ser	GCT
                   c      Tatt tttacaaaat
                     T - A
                     T - A
                     A - T
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     T G C A C     A
    T C G A        T      | | | | |     A
  T         T T C A       A C G T G     C
  G         | | | |                 T T
  G         A A G T
    T T G A        G     TAAATTTTTATAAAATTTC
                    G + T
                    C - G
                    A - T
                    T - A
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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