The detailed information of tRNA gene sequence


Sequence ID>WENV170305841
Genome IDCESI01259652
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 744
End posion on genome 655
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgttttccac
tRNA gene sequence 
GGAAGAGTGTCAGAGTGGTCTATCGTGCATCCTTGGAAAGGATGTGTAGGTTTATCCCTA
CCGGAGGTTCGAATCCTCTCTCTTCCGCCA
Downstream region at tRNA end position 
tttatctaga
Secondary structure (Cloverleaf model)
>WENV170305841	Ser	GGA
                   c      GCCA tttatctaga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    G       G A C T       G G A G G     C
    G       +   |                   T T
    T       T C G T
      C T A        G     TGTAGGTTTATCCCTACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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