The detailed information of tRNA gene sequence


Sequence ID>WENV170305956
Genome IDCESI01297056
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1434
End posion on genome 1345
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcaataaatt
tRNA gene sequence 
GGATAAGTGGTCGAGTGGTTTAAGGCGTCAGTTTTGAAAACTGAAGCATTTTAATAAATT
ATGCCGTGGGTTCGAATCCCTCCTTATCCTttt
Downstream region at tRNA end position 
ggtcaaataa
Secondary structure (Cloverleaf model)
>WENV170305956	Ser	TGA
                   t      Tttt ggtcaaataa
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        G     AGCATTTTAATAAATTATGCC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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