The detailed information of tRNA gene sequence


Sequence ID>WENV170307128
Genome IDCESJ01122724
Search identical group
Phylum/Class[CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 643
End posion on genome 569
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcttcccagc
tRNA gene sequence 
GAGAGAGTAGAGCAGCTCGGTCAGCTCGTCAGGCTCATGATCTGAAGGTCGTAGGTTCGA
ATCCTACCTCTCTCAtta
Downstream region at tRNA end position 
tttacagccc
Secondary structure (Cloverleaf model)
>WENV170307128	Met	CAT
                   c      Atta tttacagccc
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
    T C G A        A      | | | | |     G
  C         C G A G       G T A G G     C
  G         | | | |                 T T
  G         G C T C
    T C A          G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G + T
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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