The detailed information of tRNA gene sequence


Sequence ID>WENV170307715
Genome IDCESJ01285604
Search identical group
Phylum/Class[CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2973
End posion on genome 3049
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaaattatta
tRNA gene sequence 
TGAGAGAGTAGTTCAGCTTGGTTAGAATAACAGTTTTCAAAACTGCAGGTCGAGGGTTCA
AATCCTTCCTCTCTTGGtta
Downstream region at tRNA end position 
cgcaaaattt
Secondary structure (Cloverleaf model)
>WENV170307715	SeC	TCA
                   a      Gtta cgcaaaattt
                     T + G
                     G + T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T T C C     A
    T C G A        A      | | + | |     A
  T         C T T G       G A G G G     C
  G         | | | +                 T T
  G         G A A T
    T T A          A     AGGTC
                    A   C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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