The detailed information of tRNA gene sequence


Sequence ID>WENV170308057
Genome IDCESK01063055
Search identical group
Phylum/Class[CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 587
End posion on genome 660
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctttggggcc
tRNA gene sequence 
GTGCTGGTGACCGAAAGGCTAGGTGACGGATTGCAAACCCGTTTATGTGAGTTCGATTCT
CACCCAGCACTCAA
Downstream region at tRNA end position 
caatttaata
Secondary structure (Cloverleaf model)
>WENV170308057	Cys	GCA
                   c      TCAA caatttaata
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C          T T
                    T     C A C T C     A
        A A        G      | | | | |     G
      A     G C C A       G T G A G     C
      G       | | |                 T T
      G     A G G T
        C T        G     TTAT
                    A - T
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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