The detailed information of tRNA gene sequence


Sequence ID>WENV170308250
Genome IDCESL01012734
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 125
End posion on genome 200
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaaaaacatt
tRNA gene sequence 
GGATCGATCGTCTAGCCTGGCTTGGATGACGCACTCACACTGCGTAGGTCATGGGTTCAA
ATCCCATTCGATCCACtt
Downstream region at tRNA end position 
ttacccatcc
Secondary structure (Cloverleaf model)
>WENV170308250	Val	CAC
                   t      ACtt ttacccatcc
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     A - T          T A
                    T     T A C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       A T G G G     C
  G         + | | +                 T T
  G         G G A T
    C T T          G     AGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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