The detailed information of tRNA gene sequence


Sequence ID>WENV170308427
Genome IDCESL01027038
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 16873
End posion on genome 16947
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aggccgaact
tRNA gene sequence 
GGCTCCATCGTCTAGCGGACAGGACGTCGCCCTCTCAAGGCGAAAACACGGGTTCGATCC
CCGTTGGAGCCACCA
Downstream region at tRNA end position 
ggcctatcat
Secondary structure (Cloverleaf model)
>WENV170308427	Glu	CTC
                   t      ACCA ggcctatcat
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T          C T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    A       G G A C
      C A          G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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