The detailed information of tRNA gene sequence


Sequence ID>WENV170308579
Genome IDCESL01040868
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1374
End posion on genome 1448
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
accggaaaat
tRNA gene sequence 
GGGCGTATAGCTCAGTGGTAGAGCACCGTGTTGACATCGCGGGGGTCGGAAGTTCAATCC
TTCCTACGCCCACCA
Downstream region at tRNA end position 
ttttccggaa
Secondary structure (Cloverleaf model)
>WENV170308579	Val	GAC
                   t      ACCA ttttccggaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          C T
                    T     C C T T C     A
        G A        A      | | | | |     A
      T     C T C G       G G A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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