The detailed information of tRNA gene sequence


Sequence ID>WENV170308833
Genome IDCESL01065145
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1184
End posion on genome 1259
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgctcagggc
tRNA gene sequence 
GGGCCGGTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTCGGTCGCGGGTTCGATC
CCCGCTCGGCCCACTA
Downstream region at tRNA end position 
tccctttggt
Secondary structure (Cloverleaf model)
>WENV170308833	Met	CAT
                   c      ACTA tccctttggt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          C T
                    T     C G C C C     A
      T G A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     CGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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