The detailed information of tRNA gene sequence


Sequence ID>WENV170308837
Genome IDCESL01065336
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1328
End posion on genome 1253
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tcaataatta
tRNA gene sequence 
GGTCTCTTGGTGAAATGGATCATCACGACGGTCTTCGGAACCGTAATTCTGGGTTCGAGT
CCCAGGGGGACCGCCA
Downstream region at tRNA end position 
atttaataat
Secondary structure (Cloverleaf model)
>WENV170308837	Arg	TCG
                   a      GCCA atttaataat
                     G - C
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     T + G          T G
                    T     G A C C C     A
      T A A        G      | | | | |     G
    G       A G T G       C T G G G     C
    G       | | | |                 T T
    A       T C A C
      T C A        G     AATT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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