The detailed information of tRNA gene sequence


Sequence ID>WENV170308902
Genome IDCESL01072171
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 362
End posion on genome 286
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acccaatcac
tRNA gene sequence 
GGCCCCTTAGTTCAGTTGGTTAGAACGCCTGCCTGTCACGCAGGAGGTCGCAAGTTCAAG
TCTTGTAGGGGTCGCCA
Downstream region at tRNA end position 
atttatttta
Secondary structure (Cloverleaf model)
>WENV170308902	Asp	GTC
                   c      GCCA atttatttta
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T G T T C     A
      T G A        A      + | | | |     A
    T       C T T G       G C A A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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