The detailed information of tRNA gene sequence


Sequence ID>WENV170308963
Genome IDCESL01078990
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 341
End posion on genome 269
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
tccattaggc
tRNA gene sequence 
GCCACTATAGCTTAGTTGGTAGAGCACTCGCTTAGTAAGCGAGAGGTCATGGGTTCGAAT
CCCGTTGGTGGCTttt
Downstream region at tRNA end position 
tttttctatt
Secondary structure (Cloverleaf model)
>WENV170308963	Thr	AGT
                   c      Tttt tttttctatt
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     T + G
                     A - T          T A
                    T     T G C C C     A
      T G A        A      | + | | |     G
    T       T T C G       A T G G G     C
    G       + | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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