The detailed information of tRNA gene sequence


Sequence ID>WENV170309122
Genome IDCESL01101357
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3389
End posion on genome 3475
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atttcgaagg
tRNA gene sequence 
GGCCCGGTGGCCGAGTTGGTAAGGCACTGGACTGCAAATCCATGGTTTCCGCAAGGAACG
CAGGTTCGAATCCTGTCTGGGCCTCCA
Downstream region at tRNA end position 
ttcgaaaatt
Secondary structure (Cloverleaf model)
>WENV170309122	Cys	GCA
                   g      TCCA ttcgaaaatt
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    T       G C C G       G C A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     GGTTTCCGCAAGGAAC
                    C   T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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