The detailed information of tRNA gene sequence


Sequence ID>WENV170309265
Genome IDCESL01119158
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1526
End posion on genome 1600
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaccgcccgc
tRNA gene sequence 
GGCCCGTTGGCTCAGCGGTAGAGCGCCTCGTTCACATCGAGGATGCCGGCGGTTCGAGTC
CGTCACGGGCCACCA
Downstream region at tRNA end position 
tcctgtccgg
Secondary structure (Cloverleaf model)
>WENV170309265	Val	CAC
                   c      ACCA tcctgtccgg
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T G C C     A
        G A        G      | + | | |     G
      C     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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