The detailed information of tRNA gene sequence


Sequence ID>WENV170309475
Genome IDCESL01146067
Search identical group
Phylum/Class[CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 248
End posion on genome 324
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tccaatttac
tRNA gene sequence 
GGGGGTATAGCTCTAATTGGCAGAGCGGCGGTCTCCAAAACCGACGGTTGATGGTTCGAG
TCCATCTGCCCCCGCCA
Downstream region at tRNA end position 
cattgaaagg
Secondary structure (Cloverleaf model)
>WENV170309475	Trp	CCA
                   c      GCCA cattgaaagg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C T A C C     A
      A A T        A      | | | | |     G
    T       C T C G       G A T G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     CGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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