The detailed information of tRNA gene sequence


Sequence ID>WENV170310177
Genome IDCESM01018004
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 6
End posion on genome 79
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnattaa
tRNA gene sequence 
GGGGGAGTGGTATAATGGTATTACACGGGTCTCCAAAACCCTAGATCGAGGTTCGATTCC
TTGCTCCTCTGCCA
Downstream region at tRNA end position 
aatctttttt
Secondary structure (Cloverleaf model)
>WENV170310177	Trp	CCA
                   a      GCCA aatctttttt
                     G + T
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     G T T C C     A
        A A        G      | + | | |     G
      T     T A T G       C G A G G     C
      G       | | |                 T T
      G     T T A C
        T A        A     AGAT
                    C   T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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