The detailed information of tRNA gene sequence


Sequence ID>WENV170310755
Genome IDCESM01068708
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 137
End posion on genome 50
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatattttaa
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGCCGAATGGGGCTCCCTGCTAAGGAGTTGTACCTTTACGGGTA
CCAAGGGTTCGAATCCCTTTCTCTCCGCac
Downstream region at tRNA end position 
aaaaaaaaat
Secondary structure (Cloverleaf model)
>WENV170310755	Ser	GCT
                   a      GCac aaaaaaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       A A G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTACCTTTACGGGTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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