The detailed information of tRNA gene sequence


Sequence ID>WENV170310925
Genome IDCESM01085146
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 180
End posion on genome 85
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaatatccaa
tRNA gene sequence 
GGAGGTGTCCGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGTGGGACGAGTGATCC
TCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCGA
Downstream region at tRNA end position 
tctactaact
Secondary structure (Cloverleaf model)
>WENV170310925	SeC	TCA
                   a      GCGA tctactaact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        C      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     TGGGACGAGTGATCCTCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK