The detailed information of tRNA gene sequence


Sequence ID>WENV170311016
Genome IDCESM01094708
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 112
End posion on genome 199
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctttaataaa
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCTGATCGCGCACGCTTGGAAAGCGTGTTTACGGAAACGTAAC
GGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
tgcaaacaaa
Secondary structure (Cloverleaf model)
>WENV170311016	Ser	GGA
                   a      GCCA tgcaaacaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    C       T C G C
      T G A        G     TTTACGGAAACGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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