The detailed information of tRNA gene sequence


Sequence ID>WENV170311199
Genome IDCESM01115526
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 235
End posion on genome 161
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaattaatac
tRNA gene sequence 
ATAGGTATAGTGTCAATGGTAGCACGTCGGTCTCCAAAACCGAAAGTAGGAGTTCAAATC
TCTTTACCTATGCCA
Downstream region at tRNA end position 
attttaagct
Secondary structure (Cloverleaf model)
>WENV170311199	Trp	CCA
                   c      GCCA attttaagct
                     A - T
                     T - A
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T T C T C     A
      A A C        A      | + | | |     A
    T       T G T G       A G G A G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     AAGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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