The detailed information of tRNA gene sequence


Sequence ID>WENV170311271
Genome IDCESM01124480
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 272
End posion on genome 362
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctcttcact
tRNA gene sequence 
GGTGAGCTGGCTGAGTGGTTGAAAGCAGCGGTCTTGAAAACCGCCGTGGGTTAATAGCCC
ACCCGGGGTTCGAATCCCTGGCTCACCGCCA
Downstream region at tRNA end position 
tttttcccat
Secondary structure (Cloverleaf model)
>WENV170311271	Ser	TGA
                   t      GCCA tttttcccat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       C G G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CGTGGGTTAATAGCCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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