The detailed information of tRNA gene sequence


Sequence ID>WENV170311465
Genome IDCESM01145522
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 161
End posion on genome 250
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attaacaaca
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGGCACCCTGCTAAGGTGTTATACGGGTAACTGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ggagcattta
Secondary structure (Cloverleaf model)
>WENV170311465	Ser	GCT
                   a      GCCA ggagcattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATACGGGTAACTGTATC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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