The detailed information of tRNA gene sequence


Sequence ID>WENV170311659
Genome IDCESM01168534
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 254
End posion on genome 343
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcatttat
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGTCGTTGTGGCCTCCGGGTCA
CCATGGGTTCAAATCCCATACCTTCCGCCA
Downstream region at tRNA end position 
tttaaaatta
Secondary structure (Cloverleaf model)
>WENV170311659	Ser	CGA
                   t      GCCA tttaaaatta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    G       G A C C       A T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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