The detailed information of tRNA gene sequence


Sequence ID>WENV170311869
Genome IDCESM01196078
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 352
End posion on genome 277
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
attacctttt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCGTGAATGGCATTCACGAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
tcaaaataac
Secondary structure (Cloverleaf model)
>WENV170311869	Ala	GGC
                   t      ACCA tcaaaataac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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