The detailed information of tRNA gene sequence


Sequence ID>WENV170312021
Genome IDCESM01212344
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 223
End posion on genome 150
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaagtttta
tRNA gene sequence 
ATCGGTGTAGTACAATGGTAGTATGGCAGTCTCCAAAACTGAAGACGGGGGTTCGATTCC
TCCCACCGGTGCCA
Downstream region at tRNA end position 
aatattaaaa
Secondary structure (Cloverleaf model)
>WENV170312021	Trp	CCA
                   a      GCCA aatattaaaa
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C C T C C     A
        A A        A      | | + | |     G
      T     C A T G       G G G G G     C
      G     | | | +                 T T
      G     G T A T
        T A        G     AGAC
                    G   A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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