The detailed information of tRNA gene sequence


Sequence ID>WENV170312679
Genome IDCESM01385354
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 294
End posion on genome 368
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgaaaataat
tRNA gene sequence 
GGCCCGTTCGTCTATCGGTTAGGACATCAGGTTTTCATCCTGGAAAGAGGGGTTCGACTC
CCCTACGGGCTACAA
Downstream region at tRNA end position 
tttttaaaat
Secondary structure (Cloverleaf model)
>WENV170312679	Glu	TTC
                   t      ACAA tttttaaaat
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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