The detailed information of tRNA gene sequence


Sequence ID>WENV170312743
Genome IDCESM01408250
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 128
End posion on genome 57
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atattataat
tRNA gene sequence 
AGCAGGATAGCGCAGAGGTAGCGTGTTAGGCTCATGACCTAAAGGTCCCTGGTTCGATCC
CAGGTTCTGCTTatc
Downstream region at tRNA end position 
tgcccttgtg
Secondary structure (Cloverleaf model)
>WENV170312743	Met	CAT
                   t      Tatc tgcccttgtg
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C
                     G + T
                     A - T          C T
                    T     G G A C C     A
        G A        A      | | | | |     G
      A     C G C G       C C T G G     C
      G     | | | +                 T T
      G     G C G T
        T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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