The detailed information of tRNA gene sequence


Sequence ID>WENV170312891
Genome IDCESM01471282
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 290
End posion on genome 219
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaatttgaa
tRNA gene sequence 
AGCAGTGTGGCGCAGAGGCAGCGCGTCAGGCTCATAACCTGAAGGTCATAAGATCGAAAC
TTATTGCTGCTAtat
Downstream region at tRNA end position 
tttgtaaaag
Secondary structure (Cloverleaf model)
>WENV170312891	Met	CAT
                   a      Atat tttgtaaaag
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C
                     T + G
                     G + T          A A
                    T     T A T T C     A
        G A        G      | | | | |     G
      A     C G C G       A T A A G     C
      G     | | | |                 A T
      G     G C G C
        C A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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