The detailed information of tRNA gene sequence


Sequence ID>WENV170313164
Genome IDCESM01527519
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1525
End posion on genome 1452
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aacctagtat
tRNA gene sequence 
GAGGGCATGGCAGAATGGTTATGCGATGGATTGCAAATCCATTAATGAAGGTTCAATTCC
TTCTGTCCTCTCCA
Downstream region at tRNA end position 
aatagttgtc
Secondary structure (Cloverleaf model)
>WENV170313164	Cys	GCA
                   t      TCCA aatagttgtc
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T T
                    T     C T T C C     A
        A A        G      | | | | |     A
      T     G A C G       G A A G G     C
      G       | | |                 T T
      G     A T G C
        T T        G     TAAT
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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