The detailed information of tRNA gene sequence


Sequence ID>WENV170313179
Genome IDCESM01528467
Search identical group
Phylum/Class[CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1117
End posion on genome 1044
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcccttatT
tRNA gene sequence 
GGTTCATTAGTTAAATGGCTATAACAATTGATTGTCTATCAATAGTTAAGGGTTCGATTC
CCTTATGGACCGTtg
Downstream region at tRNA end position 
ctcctcaatg
Secondary structure (Cloverleaf model)
>WENV170313179	Asp	GTC
                   T      GTtg ctcctcaatg
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     A - T
                     T - A          T T
                    T     T T C C C     A
      T A A        A      | | | | |     G
    G       A T T G       A A G G G     C
    G       | | | |                 T T
    C       T A A C
      T A          A     AGTT
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK