The detailed information of tRNA gene sequence


Sequence ID>WENV170313847
Genome IDCESN01063077
Search identical group
Phylum/Class[CESN] marine metagenome genome assembly TARA_098_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1301
End posion on genome 1227
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGCGCGGTAGCCAAGTGGTAAGGCCGGGGACTGCAAATCCTCTATTCGCCGGTTCGATTC
CGGCCCGCGCCTCCA
Downstream region at tRNA end position 
ttccttactt
Secondary structure (Cloverleaf model)
>WENV170313847	Cys	GCA
                   n      TCCA ttccttactt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     C G G C C     A
        G A        A      | | | | |     G
      T     A C C G       G C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        C     TATTC
                    G - C
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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