The detailed information of tRNA gene sequence


Sequence ID>WENV170314045
Genome IDCESN01085363
Search identical group
Phylum/Class[CESN] marine metagenome genome assembly TARA_098_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1195
End posion on genome 1268
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaaataaga
tRNA gene sequence 
GGGTGAGTAGTGTAGTGGTAACACGTCAGATTCCAAACCTGAAAACTGAGGTTCGATTCC
TTGCTCGCCTGCCA
Downstream region at tRNA end position 
aaaacacagg
Secondary structure (Cloverleaf model)
>WENV170314045	Trp	CCA
                   a      GCCA aaaacacagg
                     G + T
                     G - C
                     G - C
                     T + G
                     G - C
                     A - T
                     G - C          T T
                    T     G T T C C     A
        G A        A      + + | | |     G
      T     T G T G       T G A G G     C
      G     | | | |                 T T
      G     A C A C
        T A        G     AAAC
                    T - A
                    C - G
                    A - T
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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