The detailed information of tRNA gene sequence


Sequence ID>WENV170315203
Genome IDCESO01082612
Search identical group
Phylum/Class[CESO] marine metagenome genome assembly TARA_093_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 344
End posion on genome 249
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaactgatag
tRNA gene sequence 
GGAAGAGGATCGAACCCCGGTGGGGCGCCTAGACTTCAAATCTAGTGGGAGGCGTACCAC
GTCTCCGGTGGGTTCGACTCCCACGCTCTTCCGCCA
Downstream region at tRNA end position 
cttaaacatg
Secondary structure (Cloverleaf model)
>WENV170315203	SeC	TCA
                   g      GCCA cttaaacatg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     G   G          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    C       A A G C       G T G G G     C
    G           | |                 T T
    G       G G C G
      T G G        C     TGGGAGGCGTACCACGTCTCCG
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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