The detailed information of tRNA gene sequence


Sequence ID>WENV170315696
Genome IDCESO01217227
Search identical group
Phylum/Class[CESO] marine metagenome genome assembly TARA_093_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 40
End posion on genome 116
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccattattat
tRNA gene sequence 
CGGAGTATAGCACAGTCTGGTAGTGCGCTACGTTTGGGACGTAGAGGTCTAAGGTTCAAA
TCCTTATACTCCGACCA
Downstream region at tRNA end position 
aaaatctatt
Secondary structure (Cloverleaf model)
>WENV170315696	Pro	TGG
                   t      ACCA aaaatctatt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     A T T C C     A
      T G A        A      | | | | |     A
    C       C A C G       T A A G G     C
    T       | | | |                 T T
    G       G T G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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