The detailed information of tRNA gene sequence


Sequence ID>WENV170316989
Genome IDCESP01101968
Search identical group
Phylum/Class[CESP] marine metagenome genome assembly TARA_099_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1057
End posion on genome 981
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caccatttac
tRNA gene sequence 
AGGCTCTTAGCTCAGTTGGTTAGAGCAGCGCGCTCATAACGCGACGGTCCTCGGTTCAAG
CCCGAGAGAGCCTACCA
Downstream region at tRNA end position 
tcacttaaca
Secondary structure (Cloverleaf model)
>WENV170316989	Met	CAT
                   c      ACCA tcacttaaca
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          C G
                    T     G A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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