The detailed information of tRNA gene sequence


Sequence ID>WENV170317065
Genome IDCESP01111678
Search identical group
Phylum/Class[CESP] marine metagenome genome assembly TARA_099_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 305
End posion on genome 396
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaagccat
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGGCAGCCTGCTAAGCTGTTGTACGGGGTAACTCG
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgctgcatat
Secondary structure (Cloverleaf model)
>WENV170317065	Ser	GCT
                   t      GCCA tgctgcatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACGGGGTAACTCGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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