The detailed information of tRNA gene sequence


Sequence ID>WENV170317178
Genome IDCESP01124043
Search identical group
Phylum/Class[CESP] marine metagenome genome assembly TARA_099_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 261
End posion on genome 172
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atatgataat
tRNA gene sequence 
GGAGGGATGGCTGAGTGGTTGAAAGCACCGGTTTCGAAAGCCGGCAACGGGGTAACTCGT
TCGGGGGTTCAAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
agctttttag
Secondary structure (Cloverleaf model)
>WENV170317178	Ser	CGA
                   t      GCCA agctttttag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAACGGGGTAACTCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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